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1

Experimental approach to study the effect of mutations on the protein folding pathway

Nemtseva, Elena V., Gerasimova, Marina A., Melnik, Tatiana N., Melnik, Bogdan S., Collini, Maddalena

Journal:

Year:

2019

Language:

english

File:

PDF, 1.79 MB

english, 2019

2

Studies of irreversible heat denaturation of green fluorescent protein by differential scanning microcalorimetry

Tatiana Melnik, Tatiana Povarnitsyna, Helena Solonenko, Bogdan Melnik

Journal:

Thermochimica Acta

Year:

2011

Language:

english

File:

PDF, 446 KB

english, 2011

3

Type II restriction endonuclease R.Eco29kI is a member of the GIY-YIG nuclease superfamily

Elena M Ibryashkina, Marina V Zakharova, Vladimir B Baskunov, Ekaterina S Bogdanova, Maxim O Nagornykh, Marat M Den'mukhamedov, Bogdan S Melnik, Andrzej Kolinski, Dominik Gront, Marcin Feder, Alexande

Journal:

BMC Structural Biology

Year:

2007

Language:

english

File:

PDF, 1.34 MB

english, 2007

4

How strong are side chain interactions in the folding intermediate?

Ekaterina N. Samatova, Natalia S. Katina, Vitaly A. Balobanov, Bogdan S. Melnik, Dmitry A. Dolgikh, Valentina E. Bychkova, Alexei V. Finkelstein

Journal:

Protein Science

Year:

2009

Language:

english

File:

PDF, 539 KB

english, 2009

5

Comparison of X-ray and NMR structures: Is there a systematic difference in residue contacts between X-ray- and NMR-resolved protein structures?

Sergiy O. Garbuzynskiy, Bogdan S. Melnik, Michail Yu. Lobanov, Alexei V. Finkelstein, Oxana V. Galzitskaya

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2005

Language:

english

File:

PDF, 393 KB

english, 2005

6

Importance of a single disulfide bond for the PsbO protein of photosystem II: protein structure stability and soluble overexpression inEscherichia coli

Julia Nikitina, Tatiana Shutova, Bogdan Melnik, Sergey Chernyshov, Victor Marchenkov, Gennady Semisotnov, Vyacheslav Klimov, Göran Samuelsson

Journal:

Photosynthesis Research

Year:

2008

Language:

english

File:

PDF, 554 KB

english, 2008

7

Three-state protein folding: Experimental determination of free-energy profile

Ekaterina N. Baryshnikova, Bogdan S. Melnik, Alexei V. Finkelstein, Gennady V. Semisotnov, Valentina E. Bychkova

Journal:

Protein Science

Year:

2005

Language:

english

File:

PDF, 697 KB

english, 2005

8

The major mRNP protein YB-1: Structural and association properties in solution

Guryanov, Sergey G., Filimonov, Vladimir V., Timchenko, Alexander A., Melnik, Bogdan S., Kihara, Hiroshi, Kutyshenko, Victor P., Ovchinnikov, Lev P., Semisotnov, Gennady V.

Journal:

Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics

Year:

2013

Language:

english

File:

PDF, 553 KB

english, 2013

9

Sequential Melting of Two Hydrophobic Clusters within the Green Fluorescent Protein GFP-cycle3

Melnik, Tatiana N., Povarnitsyna, Tatiana V., Glukhov, Anatoly S., Uversky, Vladimir N., Melnik, Bogdan S.

Journal:

Year:

2011

Language:

english

File:

PDF, 509 KB

english, 2011

10

Folding Intermediate and Folding Nucleus for I→N and U→I→N Transitions in Apomyoglobin: Contributions by Conserved and Nonconserved Residues

Samatova, Ekaterina N., Melnik, Bogdan S., Balobanov, Vitaly A., Katina, Natalya S., Dolgikh, Dmitry A., Semisotnov, Gennady V., Finkelstein, Alexei V., Bychkova, Valentina E.

Journal:

Biophysical Journal

Year:

2010

Language:

english

File:

PDF, 595 KB

english, 2010

11

Two HlyIIR dimers bind to a long perfect inverted repeat in the operator of the hemolysin II gene from Bacillus cereus

Ekaterina A. Rodikova, Oleg V. Kovalevskiy, Sergey G. Mayorov, Zhanna I. Budarina, Victor V. Marchenkov, Bogdan S. Melnik, Andrew P. Leech, Dmitri V. Nikitin, Michael G. Shlyapnikov, Alexander S. Solo

Journal:

Year:

2007

Language:

english

File:

PDF, 441 KB

english, 2007

12

SS-Stabilizing Proteins Rationally: Intrinsic Disorder-Based Design of Stabilizing Disulphide Bridges in GFP

Melnik, Bogdan S., Povarnitsyna, Tatiana V., Glukhov, Anatoly S., Melnik, Tatyana N., Uversky, Vladimir N.

Journal:

Journal of Biomolecular Structure and Dynamics

Year:

2012

Language:

english

File:

PDF, 1.69 MB

english, 2012

13

Prediction of protein domain boundaries from sequence alone

Oxana V. Galzitskaya, Bogdan S. Melnik

Journal:

Protein Science

Year:

2003

Language:

english

File:

PDF, 123 KB

english, 2003

14

Symmetrical Refolding of Protein Domains and Subunits: Example of the Dimeric Two-Domain 3-Isopropylmalate Dehydrogenases †

Gráczer, Éva, Varga, Andrea, Melnik, Bogdan, Semisotnov, Gennady, Závodszky, Péter, Vas, Mária

Journal:

Year:

2009

Language:

english

File:

PDF, 4.40 MB

english, 2009

15

Rates of Unfolding, Rather than Refolding, Determine Thermal Stabilities of Thermophilic, Mesophilic, and Psychrotrophic 3-Isopropylmalate Dehydrogenases †

Gráczer, Éva, Varga, Andrea, Hajdú, István, Melnik, Bogdan, Szilágyi, András, Semisotnov, Gennady, Závodszky, Péter, Vas, Mária

Journal:

Year:

2007

Language:

english

File:

PDF, 817 KB

english, 2007

16

Independent of Their Localization in Protein the Hydrophobic Amino Acid Residues Have No Effect on the Molten Globule State of Apomyoglobin and the Disulfide Bond on the Surface of Apomyoglobin Stabilizes This Intermediate State

Melnik, Tatiana N., Majorina, Maria A., Larina, Daria S., Kashparov, Ivan A., Samatova, Ekaterina N., Glukhov, Anatoly S., Melnik, Bogdan S., Khan, Rizwan H.

Journal:

Year:

2014

Language:

english

File:

PDF, 927 KB

english, 2014

17

Structural Studies of Component of Lysoamidase Bacteriolytic Complex fromLysobactersp. XL1

Tishchenko, Svetlana, Gabdulkhakov, Azat, Melnik, Bogdan, Kudryakova, Irina, Latypov, Oleg, Vasilyeva, Natalya, Leontievsky, Alexey

Journal:

The Protein Journal

Year:

2016

Language:

english

File:

PDF, 1.07 MB

english, 2016

18

Isoforms of Green Fluorescent Protein Differ from Each Other in Solvent Molecules “Trapped” inside This Protein

Glukhova, Kseniya F., Marchenkov, Victor V., Melnik, Tatiana N., Melnik, Bogdan S.

Journal:

Journal of Biomolecular Structure and Dynamics

Year:

2016

Language:

english

File:

PDF, 913 KB

english, 2016

19

Substitutions of Amino Acids with Large Number of Contacts in the Native State Have no Effect on the Rates of Protein Folding

Melnik, Bogdan S., Nagibina, Galina S., Glukhov, Anatoly S., Melnik, Tatiana N., Uversky, Vladimir N.

Journal:

Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics

Year:

2016

Language:

english

File:

PDF, 810 KB

english, 2016

20

Fluorescence lifetime components reveal kinetic intermediate states upon equilibrium denaturation of carbonic anhydrase II

Nemtseva, Elena V, Lashchuk, Olesya O, Gerasimova, Marina A., Nagibina, Galina S, Melnik, Tatiana, Melnik, Bogdan S

Journal:

Methods and Applications in Fluorescence

Year:

2017

Language:

english

File:

PDF, 758 KB

english, 2017

21

Multi-State Proteins: Approach Allowing Experimental Determination of the Formation Order of Structure Elements in the Green Fluorescent Protein

Melnik, Tatiana N., Povarnitsyna, Tatiana V., Glukhov, Anatoly S., Melnik, Bogdan S., Baskakov, Ilia V.

Journal:

Year:

2012

Language:

english

File:

PDF, 936 KB

english, 2012

22

Formation of Amyloid-Like Fibrils by Y-Box Binding Protein 1 (YB-1) Is Mediated by Its Cold Shock Domain and Modulated by Disordered Terminal Domains

Guryanov, Sergey G., Selivanova, Olga M., Nikulin, Alexey D., Enin, Gennady A., Melnik, Bogdan S., Kretov, Dmitry A., Serdyuk, Igor N., Ovchinnikov, Lev P., Permyakov, Eugene A.

Journal:

Year:

2012

Language:

english

File:

PDF, 728 KB

english, 2012

23

Reliability analysis of metro vehicles operating in Poland

Melnik, Rafał, Koziak, Seweryn, Sowiński, Bogdan, Chudzikiewicz, Andrzej

Journal:

Transportation Research Procedia

Year:

2019

Language:

english

File:

PDF, 967 KB

english, 2019

24

Intrinsic Disorder-Based Design of Stable Globular Proteins

Nagibina, Galina S., Glukhova, Ksenia A., Uversky, Vladimir N., Melnik, Tatiana N., Melnik, Bogdan S.

Journal:

Year:

2019

File:

PDF, 4.78 MB

2019

25

Natural container for drug storage and delivery: chimeric GFP with embedded xenogenic peptide

Glukhova, Ksenia A., Klyashtorny, Vladislav G., Uversky, Vladimir N., Melnik, Bogdan S.

Journal:

Journal of Biomolecular Structure and Dynamics

Year:

2020

File:

PDF, 691 KB

2020

26

Loops linking secondary structure elements affect the stability of the molten globule intermediate state of apomyoglobin

Majorina, Maria A., Balobanov, Vitaly A., Uversky, Vladimir N, Melnik, Bogdan S.

Journal:

Year:

2020

File:

PDF, 10.67 MB

2020

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